The most important tool for me is the tag editor. MP3Tag is the basis of my library. Without it my library would be a jumbled mess of genre chaos. And I have 100K files on an 8TB SSD in my main HQPlayer Ubuntu music server, as well as on a NAS with Plex for remote streaming.
I mainly get files via downloads these days, particularly from Bandcamp and from Qobuz.
For ripping CDs, I use Foobar at FLAC8. For DVD-Audio, DVD Audio Extractor. For SACD ISOs, Sonore’S ISO2DSD, using Sony’s DSF so that the tags can be edited.
For Blu-rays, I use MakeMKV and start a journey reprocessing via the first MKV to MKAs and MP4s and up to 16-channel WAV-files with decoded ATMOS in them, using MKVToolNix followed by XMediaRecode (for MP4) and MusicMediaHelper, which in turn depends on the Dolby Reference Player for ATMOS into WAV. As a final ATMOS touch, I also like having the MLP files, which I crack out of the MKVs or MKAs via MKVCleaver.
All these except the MLP files go through MP3Tag in the end for tag editing.
Bandcamp is the best source of cover art for me, followed by Amazon (I check across global sites for the right version) and Discogs.
XRecode, with its stellar variety of output formats, including DSD, also should get an honourable mention.
And that is my music file toolkit.

