I don't know of any Reference Recording that would be considered extremely good in terms of musical content although they are very good sonically. For Jazz, I can recommend Harry James and His Big Band "King James Version."
I would also recommend M&K Realtime direct to disc recordings (not recorded to tape, the live feed went directly to the cutting head making the record lacquer). They did some decent jazz recordings in terms of music, and of course, spectacular sound. Look for covers of Ellington classics called "For Duke," an Earl Hines recording called "Fatha," Freddie Hubbards "Back to Birdland," and Ed Graham's "Hot Stix."
As others have mentioned, there are many great jazz recordings that have been reissued by the likes of Analogue Productions and other companies that sound fantastic. There are WAY too many good reissues to get into here. But, I will mention that a good reissue of Sonny Rollins' "Saxophone Colossus" will blow your mind in terms of how great good mono can sound; this is great music--sample "St. Thomas" off that album, a truly great track. For a great stereo Sonny Rollins album, look for reissues of "Way Out West" (I believe my copy is from Analogue Productions).
Many older original vinyl releases of jazz have not been matched by reissues. This might be the case of the original tapes deteriorating a bit. While Blue Note reissues can be really good, many originals sound better. Unfortunately, Blue Note issued so few copies that originals are extremely pricey. You can do better price wise getting original Columbia Records jazz recordings because they had larger pressing runs. I demonstrate for friends how shockingly good original Columbia stereo recordings from the late 1950's sound by playing Ellington's "Blues in Orbit" and Brubeck's "Time Out." Both have good reissues, including good digital versions, but the original "six-eye" Columbia's are even better.
One more killer good sounding album is that of the Japanese group "The Yamamoto Trio--"Midnight Sugar" on Three Blind Mice (TBM) label. I know there have been many reissues; I have the original release but that has become quite expensive.