I agree you should first do everything without applying any filtering. Place the speakers, then find good locations for the subwoofers. Since you have 3 subwoofers, you are probably going to have to treat at least two of them as a single channel so keep that in mind during placement: in other words two of them probably need to be the same distance from your seating position.
Room treatments should go on either as part of your first step in speaker positioning, or right afterwards. Since everything coming next is going to be influenced by the treatments.
Second I would use Room EQ Wizard and Multi-Sub Optimizer to perform PEQ independently on each subwoofer (two of which will be grouped into a single channel in the SHD) to flatten their response.
Third, use Room EQ Wizard to figure out the appropriate delays (positive or negative) for your subwoofers, relative to one of your main speakers. Enter these delays into the SHD for the subwoofer outputs.
At this point, your subwoofers should have relatively flat frequency responses and be time-aligned with one of your main speakers.
Finally run Dirac.
Room treatments should go on either as part of your first step in speaker positioning, or right afterwards. Since everything coming next is going to be influenced by the treatments.
Second I would use Room EQ Wizard and Multi-Sub Optimizer to perform PEQ independently on each subwoofer (two of which will be grouped into a single channel in the SHD) to flatten their response.
Third, use Room EQ Wizard to figure out the appropriate delays (positive or negative) for your subwoofers, relative to one of your main speakers. Enter these delays into the SHD for the subwoofer outputs.
At this point, your subwoofers should have relatively flat frequency responses and be time-aligned with one of your main speakers.
Finally run Dirac.