Your Rogue amps input sensitivity is 1V (high sensitivity). Your QS input sensitivity is 9V (very low). What this means is that the gain (and it's tube noise) from your pre-amp's tube section will be magnified substantially more with the Rogue and, especially when driving highly efficient speakers such as yours, will result in noise. This is not controllable by using your pre-amps volume control as it is in the circuit before the tube section which is always seen by the amp at it's full output gain.
Your problem could be that the tubes in your pre-amp are not 'low noise' enough for the Rogue Amp when it is amplifying your high efficiency speakers. If low noise tubes are not the problem and you still want to use your pre-amp with this amp/speaker combo you can try using in-line attenuators at the amp inputs to reduce the gain from your pre-amp. This may be inelegant but there is not much down side - it is nothing much more that a fixed value resistor in this kind of attenuator.
Hope that helps a bit.
Your problem could be that the tubes in your pre-amp are not 'low noise' enough for the Rogue Amp when it is amplifying your high efficiency speakers. If low noise tubes are not the problem and you still want to use your pre-amp with this amp/speaker combo you can try using in-line attenuators at the amp inputs to reduce the gain from your pre-amp. This may be inelegant but there is not much down side - it is nothing much more that a fixed value resistor in this kind of attenuator.
Hope that helps a bit.