It may not affect the balance of the disc, but it could definitely have some effect on the "spurious" reflections happening in the transport well. There have been numerous articles written, and tweaks created to reduce these "spurious" reflections of the laser light bouncing around in the transport. The infamous "Green Pen" and other tweaks have been created to reduce this phenomenon. It is entirely possible that various types of label printing could have similar effects, either better or worse.
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